BizTalk 2006 R2 when installing the EDI/AS2 component (or when re-installing), sometimes
there are some SSIS packages/jobs left that need to be manually deleted

My good mate Rahul has entered the world of
blogging
!!! and has blogged about
this very issue and what he did to get around it.

Well done Rahul!!!!

Also I might add upon  a reinstall of BTS 2006/R2 sometimes there
are the BAM Alerts notification service instance left over as well
 –
that typically needs to be manually removed from within the Sql Workbench.

Enjoy